Illustrations of the 22 Potential Human Novel Protein-Coding Genes

 

22 potential human novel protein-coding genes were identified through CGI from human fetal hippocampus ESTs database. The CDS length indicates the amino acid residuals, which were extracted by the ESTScan program. The different color boxes represent distinct homology with model organisms according to their identity rate of high score pairment (HSP). The four types of black-and-white shadings indicate the different identity rate. : 80-100%; : 50-80%; : 25-50%; : 0-25%. R. Rattus norvegicus; C. Caenorhabditis elegans; D. Drosphila melanogaster; A. Arabidopsis thaliana. The EST BM174930 is a homolog of Gallus, with identity rate 75%. The EST BM174907 is a homolog of Macaca fascicularis, with identity rate 99%.

 


EST

Length
CDS
ID%
Chromosome
sequence
(bp)
Length(AA)
R
D
C
A
ORF(bp)

Homologs of Model Organisms
Localization

BM174886
307
101

606
Rattus Norvegicus unknown gene
18q21.1
BM174887
464
73
741
CG11388 gene product
3q29
BM174889
454
104
1212
Mice M-Sema F=a factor in neural network development
2q11.1
BM174930
438
140
636
syndemos
16p13.3
BM174941
469
55
807
cerebellar postnatal development protein-1
1q21.3
BM174896
531
153
1404
Similar to Mus. Pancortin-3 protein
9q34.3
BM174907
486
135
1366
hypothetical protein
8q22.1
BM174906
542
86
948
hypothetical protein
15q24.2
BM174958
506
82
1125
hypothetical protein
3q25.1
BM174947
482
92
1410
Similar to R. norvegicus fatty and transport protein
19p13.12
BM174951
251
79
>7500
Kinesin family member 21B
1q32.1

Not available
BM174956
437
144
1998
Atu
15q21.2
BM174923
338
102
>8000
Dynein heavy chain, cytosolic (DYHC)
3q13.33

Not available
BM174901
429
133
1404
putative neuronal cell adhesion molecule
15q22.2
BM174944
578
183
1464
microtubule-associated protein 6
11q13.5
BM174950
421
106
909
hypothetical protein C54G10, C. elegans
14q32.2
BM174904
541
175
978
Proline rich synapse associated protein 2
22q13.33
BM174890
219
69
1377
formin-like protein
2p23.3
BM259607
281
85
4974
gene trg protein
13q32.3
BM181079
458
153
1470
Similar to coronin, acting binding protein
11q13.3
BM259606
446
88
1419
CG9011 geen product
4q21.3
BM259608
335
109
>8000
Dynein, cytosolic, heavy chain1
14q32.31
Not available